Contiguity is an interactive software for the visualization and manipulation of de novo genome assemblies. Contiguity creates and displays information on contig adjacency which is contextualized by the simultaneous display of comparison between assembled contigs and the reference sequence.
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If you use Contiguity please cite:
Mitchell J Sullivan, Nouri L Ben Zakour, Brian M Forde, Mitchell Stanton-Cook, Scott A Beatson. (2015). Contiguity: Contig adjacency graph construction and visualisation. PeerJ PrePrints 3:e1273 https://doi.org/10.7287/peerj.preprints.1037v1